Scientific Directory

Thèmes de recherche développés

Publications CSM

2024

• Bacterial symbionts of the precious coral Corallium rubrum are differentially distributed across colony-specific compartments and differ among colormorphs
  van de Water J A J M, Allemand D, Ferrier-Pagès C
  Environ Microbiol Rep 16(2): e13236
• In vivo injection of exogenous molecules into octocorals: Application to the study of calcification
  Forin C, Loentgen G, Allemand D, Tambutté S, Ganot P
  Limnol Oceanogr Methods 3.10610

2023

• Climate change impacts on Mediterranean fisheries: A sensitivity and vulnerability analysis for main commercial species
  Hilmi N, Farahmand S, Cinar M, Safa A, Lam V W Y, Djoundourian S, Shahin W, Ben Lamine E, Schickele A, Guidetti P, Allemand D, Raybaud V
  ecolecon 211 (2023): 107889
• Differences in carbonate chemistry up‐regulation of long‐lived reef‐building corals
  Canesi M, Douville E, Montagna P, Taviani M, Stolarski J, Bordier L, Dapoigny A, Coulibaly G E H, Simon A-C, Agelou M, Fin J, Metzl N, Iwankow G, Allemand D, Planes S, Moulin C, Lombard F, Bourdin G, Troublé R, Agostini S, Banaigs B, Boissin E, Boss E, Bowler C, de Vargas C, Flores M, Forcioli D, Furla P, Gilson E, Galand P E, Pesant S, Sunagawa S, Thomas O P, Vega Thurber R, Voolstra C R, Wincker P, Zoccola D, Reynaud S
  Sci Rep (2023) 13:11589
• Different environmental response strategies in sympatric corals from Pacific Islands
  Porro B, Zamoum T, Forcioli D, Gilson E, Poquet A, Di Franco E, Barnay-Verdier S, Lombard F, Voolstra C R, Hume B C C, Galand P E, Moulin C, Boissin E, Bourdin G, Iwankow G, Poulain J, Romac S, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Pesant S, Reynaud S, Sullivan M B, Sunagawa S, Thomas O P, Troublé R, Vega Thurber R, Wincker P, Zoccola D, Planes S, Allemand D, Röttinger E, Furla P
  Commun Earth Environ 4, 311 (2023)
• Disparate genetic divergence patterns in three corals across a pan-Pacific environmental gradient highlight species-specific adaptation
  Voolstra C R, Hume B C C, Armstrong E J, Mitushasi G, Porro B, Oury N, Agostini S, Boissin E, Poulain J, Carradec Q, Paz-Garcia D A, Zoccola D, Magalon H, Moulin C, Bourdin G, Iwankow G, Romac S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Furla P, Galand P E, Gilson E, Lombard F, Pesant S, Reynaud S, Sullivan M B, Sunagawa S, Thomas O P, Troublé R, Vega Thurber R, Wincker P, Planes S, Allemand D, Forcioli D
  npj biodivers 2, 15 (2023)
• Diversity of the Pacific Ocean coral reef microbiome
  Galand P E, Ruscheweyh H-J, Salazar G, Hochart C, Henry N, Hume B C C, Oliveira P H, Perdereau A, Labadie K, Belser C, Boissin E, Romac S, Poulain J, Bourdin G, Iwankow G, Moulin C, Armstrong E J, Paz-Garcia D A, Ziegler M, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Forcioli D, Furla P, Gilson E, Lombard F, Pesant S, Reynaud S, Thomas O P, Troublé R, Zoccola D, Voolstra C R, Vega Thurber R, Sunagawa S, Wincker P, Allemand D, Planes S
  Nat Commun 14: 3039 (2023)
• Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean
  Hochart C, Paoli L, Ruscheweyh H-J, Salazar G, Boissin E, Romac S, Poulain J, Bourdin G, Iwankow G, Moulin C, Ziegler M, Porro B, Armstrong E J, Hume B C C, Aury J-M, Pogoreutz C, Paz-Garcia D A, Nugues M M, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Forcioli D, Furla P, Gilson E, Lombard F, Pesant S, Reynaud S, Thomas O P, Troublé R, Wincker P, Zoccola D, Allemand D, Planes S, Vega Thurber R, Voolstra C R, Sunagawa S, Galand P E
  Nat Commun 14: 3037 (2023)
• Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
  Veglia A J, Bistolas K S I, Voolstra C R, Hume B C C, Ruscheweyh H-J, Planes S, Allemand D, Boissin E, Wincker P , Poulain J, Moulin C, Bourdin G, Iwankow G, Romac S, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Forcioli D, Furla P, Galand P E, Gilson E, Lombard F, Pesant S, Reynaud S, Sunagawa S, Thomas O P, Troublé R, Zoccola D, Correa A M S, Vega Thurber R
  Comm Biol 6: 566 (2023)
• Holobiont responses of mesophotic precious red coral Corallium rubrum to thermal anomalies
  Tignat-Perrier R, van de Water J A J M, Allemand D, Ferrier-Pagès C
  Environ Microbiome 18, 70 (2023)
• Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean
  Armstrong E J, Lê-Hoang J, Carradec Q, Aury J-M, Noel B, Hume B C C, Voolstra C R, Poulain J, Belser C, Paz-Garcia D A, Cruaud C, Labadie K, Da Silva C, Moulin C, Boissin E, Bourdin G, Iwankow G, Romac S, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Forcioli D, Furla P, Galand P E, Gilson E, Lombard F, Pesant S, Reynaud S, Sullivan M B, Sunagawa S, Thomas O P, Troublé R, Vega Thurber R, Zoccola D, Planes S, Allemand D, Wincker P
  Nat Commun 14: 3056 (2023)
• Insights and achievements from the Tara Pacific expedition
  Planes S, Allemand D
  Nat Commun 14: 3131 (2023)
• Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
  Belser C, Poulain J, Labadie K, Gavory F, Alberti A, Guy J, Carradec Q, Cruaud C, Da Silva C, Engelen S, Mielle P, Perdereau A, Samson G, Gas S, Genoscope Technical Team, Voolstra C R, Galand P E, Flores J M, Hume B C C, Perna G, Ziegler M, Ruscheweyh H-J, Boissin E, Romac S, Bourdin G, Iwankow G, Moulin C, Paz Garcia D A, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Forcioli D, Furla P, Gilson E, Lombard F, Pesant S, Reynaud S, Sunagawa S, Thomas O P, Troublé R, Vega Thurber R, Zoccola D, Scarpelli C, Jacoby E, Oliveira P H, Aury J-M, Allemand D, Planes S, Wincker P
  Nat Commun 10: 326 (2023)
• Multi-omics determination of metabolome diversity in natural coral populations in the Pacific Ocean
  Reddy M M, Goossens C, Zhou Y, Chaib S, Raviglione D, Nicolè F, Hume B C C, Forcioli D, Agostini S, Boissin E, Boss E, Bowler C, de Vargas C, Douville E, Flores M, Furla P, Galand P E, Gilson E, Lombard F, Pesant S, Reynaud S, Sullivan M B, Sunagawa S, Troublé R, Vega Thurber R, Wincker P, Zoccola D, Voolstra C R, Allemand D, Planes S, Thomas O P, Banaigs B
  Commun Earth Environ 4, 281 (2023)
• Pervasive tandem duplications and convergent evolution shape coral genomes
  Noel B, Denoeud F, Rouan A, Buitrago-Lopez C, Capasso L, Poulain J, Boissin E, Pousse M, Da Silva C, Couloux A, Armstrong E, Carradec Q, Cruaud C, Labadie K, Lê-Hoang J, Tambutté S, Barbe V, Moulin C, Bourdin G, Iwankow G, Romac S, Agostini S, Banaigs B, Boss E, Bowler C, de Vargas C, Douville E, Flores J-M, Forcioli D, Furla P, Galand P E, Lombard F, Pesant S, Reynaud S, Sullivan M B, Sunagawa S, Thomas O P, Troublé R, Vega Thurber R, Allemand D, Planes S, Gilson E, Zoccola D, Wincker P, Voolstra C R, Aury J-M
  Genome Biol (2023)24:123
• Redistribution of fisheries catch potential in Mediterranean and North European waters under climate change scenarios
  Ben Lamine E, Schickele A, Guidetti P, Allemand D, Hilmi N, Raybaud V
  Sci Total Environ 163055
• Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals
  Rouan A, Pousse M, Djerbi N, Porro B, Bourdin G, Carradec Q, Hume B C C, Poulain J, Lê-Hoang J, Armstrong E, Agostini S, Salazar G, Ruscheweyh H-J, Aury J-M, Paz-Garcia D A, McMinds R, Giraud-Panis M-J, Deshuraud R, Ottaviani A, Die Morini L, Leone C, Wurzer L, Tran J, Zoccola D, Pey A, Moulin C, Boissin E, Iwankow G, Romac S, de Vargas C, Banaigs B, Boss E, Bowler C, Douville E, Flores M, Reynaud S, Thomas O P, Troublé R, Vega Thurber R, Planes S, Allemand D, Pesant S, Galand P E, Wincker P, Sunagawa S, Röttinger E, Furla P, Voolstra C R, Forcioli D, Lombard F, Gilson E
  Nat Commun 14: 3038 (2023)
• Testing hypotheses on the calcification in scleractinian corals using a spatio-temporal model that shows a high degree of robustness
  Willard H F, Deutekom E S, Allemand D, Tambutté S, Kaandorp J A
  jtbi 561;111382
• Tropical Blue Carbon: Solutions and Perspectives for Valuations of Carbon Sequestration
  Hilmi N, Benitez Carranco M B, Broussard D, Mathew M, Djoundourian S, Cassotta S, Safa A, Maliki S, Descroix-Comanducci F, Allemand D, Berthomieu C, Hall-Spencer J M, Ferrier-Pagès C
  Front Clim 5 (2023):10.3389
• Unveiling microbiome changes in Mediterranean octocorals during the 2022 marine heatwaves: quantifying key bacterial symbionts and potential pathogens
  Prioux C, Tignat-Perrier R, Gervais O, Estaque T, Schull Q, Reynaud S, Béraud E, Mérigot B , Beauvieux A, Marcus M-I, Richaume J, Bianchimani O, Cheminée A, Allemand D, Ferrier-Pagès C
  Microbiome (2023) 11/271

2022

• An alternative and effective method for extracting skeletal organic matrix adapted to the red coral Corallium rubrum
  Ganot P, Loentgen G, Marin F, Plasseraud L, Allemand D, Tambutté S
  Biology Open bio.059536; 19
• An evolution towards scientific consensus for a sustainable ocean future
  Gaill F, Brodie Rudolph T, Lebleu L, Allemand D, Blasiak R, Cheung W W L, Claudet J, Cavaleri Gerhardinger L, Le Bris N, Levin L, Pörtner H-O, Visbeck M, Zivian A, Bahurel P, Bopp L, Bowler C, Chlous F, Cury P, Gascuel D, Goyet S, Hilmi N, Ménard F, Micheli F, Mullineaux L, Parmentier R, Sicre M-A, Speich S, Thébaud O, Thiele T, Bowler M, Charvis P, Cuvelier R, Houllier F, Palazot S, Staub F, Poivre d'Arvor O
  npj OS (2022)1:7
• Coral holobionts and biotechnology: from Blue Economy to coral reef conservation
  van de Water J A J M, Tignat-Perrier R, Allemand D, Ferrier-Pagès C
  COB Vol. 74, pp. 110-121
• Expected contraction in the distribution ranges of demersal fish of high economic value in the Mediterranean and European Seas
  Ben Lamine E, Schickele A, Goberville E, Beaugrand G, Allemand D, Raybaud V
  Sci Rep 12:10150
• The Biology and Biomineralogy of the Red Coral : the Lacaze-Duthiers Legacy
  Vielzeuf D, Allemand D, Shick J M, Arnaud V, Bodin S, Bramanti L
  VIEMILIEU 72 (3-4): 63-127
• The Effect of Thermal Stress on the Physiology and Bacterial Communities of Two Key Mediterranean Gorgonians
  Tignat-Perrier R, van de Water J A J M, Guillemain D, Aurelle D, Allemand D, Ferrier-Pagès C
  AEM Vol. 88, No. 6, e02340-21

2021

• Designing a blueprint for coral reef survival
  Kleypas J, Allemand D, Anthony K, Baker A C, Beck M W, Hale L Z, Hilmi N, Hoegh-Guldberg O, Hughes T, Kaufman L, Kayanne H, Magnan A K, Mcleod E, Mumby P, Palumbi S, Richmond R H, Rinkevich B, Steneck R S, Voolstra C R, Wachenfeld D, Gattuso J-P
  Biological Conservation 257: 109107
• Effects of Ocean Acidification on Resident and Active Microbial Communities of Stylophora pistillata
  Barreto M M, Ziegler M, Venn A A, Tambutté E, Zoccola D, Tambutté S, Allemand D, Antony C P, Voolstra C R, Aranda M
  Front Microbiol 12: 707674
• Noise pollution on coral reefs? — A yet underestimated threat to coral reef communities
  Ferrier-Pagès C, Leal M C, Calado R, Schmid D W, Bertucci F, Lecchini D, Allemand D
  Mar Pollut Bull 165: 112129
• The evolution of calcification in reef-building corals
  Wang X, Zoccola D, Liew Y J, Tambutté E, Cui G, Allemand D, Tambutté S, Aranda M
  Mol Biol Evol 38(9): 3543–3555
• The skeletome of the red coral Corallium rubrum indicates an independent evolution of biomineralization process in octocorals
  Le Roy N, Ganot P, Aranda M, Allemand D, Tambutté S
  BMC Ecol Evol 21(1): 1-21

2020

• Corail, un trésor à préserver
  Calcagno R, Allemand D, Fautrier B
  Glénat (Eds) 144p.
• From Science to Solutions: Ocean acidification Impacts On Select Coral Reefs
  Hilmi N, Allemand D, Swarzenski P
  Regional Studies in Marine Science Editorial of the Special Issue of Regional Studies in Marine Science, 33: 100957
• Human Health and Ocean Pollution
  Landrigan P J, Stegeman J J, Fleming L E, Allemand D, Anderson D M, Backer L C, Brucker-Davis F, Chevalier N, Corra L, Czerucka D, Dechraoui Bottein M-Y, Demeneix B, Depledge M, Deheyn D D, Dorman C J, Fénichel P, Fisher S, Gaill F, Galgani F, Gaze W H, Giuliano L, Grandjean P, Hahn M E, Hamdoun A, Hess P, Judson B, Laborde A, McGlade J, Mu J, Mustapha A, Neira M, Noble R T, Pedrotti M L, Reddy C, Rocklöv J, Scharler U M, Shanmugam H, Taghian G, van de Water J A J M, Vezzulli L, Weihe P, Zeka A, Raps H, Rampal P
  Annals of Global Health 86(1): 144, 1-64
• Longevity strategies in response to light in the reef coral Stylophora pistillata
  Ottaviani A, Eid R, Zoccola D, Pousse M, Dubal J-M, Barajas E, Jamet K, Lebrigand K, Labépie P, Baudoin C, Giraud-Panis M-J, Rouan A, Beauchef G, Guéré C, Vié K, Barbry P, Tambutté S, Gilson E, Allemand D
  Sci Rep 10, Article 19937
• Tara Pacific expedition’s atmospheric measurements of marine aerosols across the Atlantic and Pacific oceans - Overview and Preliminary results
  Flores J M, Bourdin G, Altaratz O, Trainic M, Lang-Yona N, Dzimban E, Steinau S, Tettich F, Planes S, Allemand D, Agostini S, Banaigs B, Boissin E, Boss E, Douville E, Forcioli D, Furla P, Galand P E, Sullivan M, Gilson E, Lombard F, Moulin C, Pesant S, Poulain J, Reynaud S, Romac S, Sunagawa S, Thomas O P, Troublé E, de Vargas C, Vega Thurber R, Voolstra C R, Wincker P, Zoccola D, Bowler C, Gorsky G, Rudich Y, Vardi A, Koren I
  Bulletin of the American Meteorological Society 101(5): E536–E554
• The World Coral Conservatory (WCC): A Noah’s ark for corals to support survival of reef ecosystems
  Zoccola D, Ounaïs N, Barthelemy D, Calcagno R, Gaill F, Henard S, Hoegh-Guldberg O, Janse M, Jaubert J, Putnam H, Salvat B, Voolstra CR, Allemand D
  PLoS Biol 18(9): e3000823
• The World Coral Conservatory (WCC): Offering new hope for corals
  Planas-Bielsa V, Benchaouir R, Allemand D, Zoccola D
  Ercim News 123: 16-17
• Ubiquitous macropinocytosis in anthozoans
  Ganot P, Tambutté E, Caminiti Segonds N, Toullec G, Allemand D, Tambutté S
  Elife 9: e50022

2019

• Coral Li/Mg thermometry: Caveats and constraints
  Cuny-Guirriec K, Douville E, Reynaud S, Allemand D, Bordier L, Canesi M, Mazzoli C, Taviani M, Canese S, McCulloch M
  Chem Geol 523: 162-178
• Coral reefs of the Red Sea - Challenges and potential solutions
  Fine M, Cinar M, Voolstra C, Safa A, Rinkevich B, Laffoley D, Hilmi N, Allemand D
  Regional Studies in Marine Science 25: 100198
• Effects of light and darkness on pH regulation in three coral species exposed to seawater acidification
  Venn A A, Tambutté E, Caminiti Segonds N, Técher N, Allemand D, Tambutté S
  Sci Rep 9(1):2201
• Expanding Tara Oceans protocols for underway, ecosystemic sampling of the ocean-atmosphere interface during Tara Pacific Expedition (2016-2018)
  Gorsky G, Bourdin G, Lombard F, Pedrotti M L, Audrain S, Bin N, Boss E, Bowler C, Cassar N, Caudan L, Chabot G, Cohen N R, Cron D, De Vargas C, Dolan J R, Douville E, Elineau A, Flores J M, ..., Reynaud S, Sunagawa S, Thomas O P, Vega Thurber R L, Zoccola D, Tara Pacific Consortium, Planes S, Allemand D, Karsenti E
  Front Mar Sci 6(750): 1-20
• Les coraux et le changement climatique
  Allemand D
  Ocean and climate change, Scientific Notes - Plateforme Océan et Climat 2019: 36-49
• Ocean acidification impacts on coral reefs: From sciences to solutions
  Allemand D, Osborn D
  Regional Studies in Marine Science 28: 100558
• Photochemical response of the scleractinian coral Stylophora pistillata to some sunscreen ingredients
  Fel J-P, Lacherez C, Bensetra A, Mezzache S, Béraud E, Léonard M, Allemand D, Ferrier-Pagès C
  Coral Reefs 38(1): 109-122
• The Tara Pacific expedition—A pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean
  Planes S, Allemand D, Agostini S, Banaigs B, Boissin E, Boss E, Bourdin G, Bowler C, Douville E, Flores J-M, Forcioli D, Furla P, Galand P E, Ghiglione J-F, Gilson E, Lombard F, Moulin C, Pesant S, Poulain J, Reynaud S, Romac S, Sullivan M B, Sunagawa S, Thomas O P, Troublé R, de Vargas C, Vega Thurber R, Voolstra C R, Wincker P, Zoccola D, The Tara Pacific Consortium
  PLoS Biol 17(9): e3000483

2018

• Coral-based tourism in Egypt's Red Sea
  Hilmi N, Safa A, Reynaud S, Allemand D
  Coral Reefs-Tourism, Conservation and Management Part I (3): 29-43
• Enhancing eco-engineering of coastal infrastructure with eco-design: Moving from mitigation to integration
  Pioch S, Relini G, Souche J C, Stive M J F, De Monbrison D, Nassif S, Simard F, Allemand D, Saussol P, Spieler R
  Ecol Engin 120: 574-584
• Epigenome-associated phenotypic acclimatization to ocean acidification in a reef-building coral
  Liew Y J, Zoccola D, Li Y, Tambutté E, Venn A A, Michell C T, Cui G, Deutekom E S, Kaandorp J A, Voolstra C R, Forêt S, Allemand D, Tambutté S, Aranda M
  Sci Adv 4(6): eaar8028
• Host-microbe interactions in octocoral holobionts - recent advances and perspectives
  van de Water J A J M, Allemand D, Ferrier-Pagès C
  Microbiome 6(1): 64
• How does an animal behave like a plant? Physiological and molecular adaptations of zooxanthellae and their hosts to symbiosis
  Allemand D, Furla P
  Comptes Rendus Biologies 341: 276-280
• Le plastique, un danger pour les récifs coralliens
  Courtial L, Allemand D, Furla P
  Encyclopédie de l'Environnement
• Les récifs coralliens, importance, menaces et solutions
  Allemand D
  La Connaissance des océans au service du développement durable. INDEMER Actes de la Conférence Internationale, Monaco 27-28 Avril 2017, Chap III: 141-159
• Our vital ocean
  Allemand D
  In Water is life: thoughts of our generation L. Aversa (Eds.).pp. 87. StarGroup Books.
• Small is Big…? La Principauté de Monaco à la pointe de l’innovation scientifique
  Allemand D
  L'homme, la société, la paix. Ed. Broché 6

2017

• Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals
  Voolstra C, Li Y, Liew Y J, Baumgarten S, Zoccola D, Flot J-F, Tambutté S, Allemand D, Aranda M
  Sci Rep 7(1): 17583
• Comparative Assessment of Mediterranean Gorgonian-Associated Microbial Communities Reveals Conserved Core and Locally Variant Bacteria
  van de Water J A J M, Melkonian R, Voolstra C R, Junca H, Béraud E, Allemand D, Ferrier-Pagès C
  Microb Ecol 73(2): 466-478
• Computing the carbonate chemistry of the coral calcifying medium and its response to ocean acidification
  Raybaud V, Tambutté S, Ferrier-Pagès C, Reynaud S, Venn A A, Tambutté E, Nival P, Allemand D
  J Theor Biol 424: 26-36
• Coral calcifying fluid pH is modulated by seawater carbonate chemistry not solely seawater pH
  Comeau S, Tambutté E, Carpenter R C, Edmunds P J, Evensen N R, Allemand D, Ferrier-Pagès C, Tambutté S, Venn A A
  Proc R Soc Lond, B, Biol Sci 284(1847): 20161669
• Coraux : les ingénieurs des océans sont menacés
  Courtial L, Allemand D, Furla P
  Encyclopédie de l'Environnement [en ligne ISSN 2555-0950]
• In vivo pH measurement at the site of calcification in an octocoral
  Le Goff C, Tambutté E, Venn A A, Técher N, Allemand D, Tambutté S
  Sci Rep 7: 11210
• Intoxication à la palytoxine ou la légende de Limu-make-o’hana
  Beau N, Allemand D, Molinatti E, Claessens Y E
  Ann Fr Med Urgence 7(1): 52-54
• Les récifs coralliens peuvent-ils s’adapter au changement global ?
  Allemand D
  Les mécanismes d’adaptation de la biodiversité aux changements climatiques et leurs limites Fiche thématique du Rapport Académie des Sciences, Chap. 3, Fiche 3.5: 99-104
• Océan et Santé Humaine
  Rampal P, Allemand D
  L'océan à découvert CNRS Editions: 28-29
• Seasonal Stability in the Microbiomes of Temperate Gorgonians and the Red Coral Corallium rubrum Across the Mediterranean Sea
  van de Water J A J M, Voolstra C, Rottier C, Cocito S, Peirano A, Allemand D, Ferrier-Pagès C
  Microb Ecol 75(1): 274-288
• Structural and functional analysis of coral Hypoxia Inducible Factor
  Zoccola D, Morain J, Pagès G, Caminiti Segonds N, Giuliano S, Tambutté S, Allemand D
  PLoS ONE 12(11): e0186262
• The Ocean and Human Health
  Rampal P, Allemand D
  The Ocean revealed CNRS Edition, Part One The Ocean: Key challenges (5): 28-29
• Y aura-t-il encore des coraux dans la mer ?
  Allemand D, Tambutté S, Zoccola D
  Recherche 521: 52-57

2016

• Carbonic Anhydrases in Cnidarians: Novel Perspectives from the Octocorallian Corallium rubrum
  Le Goff C, Ganot P, Zoccola D, Caminiti Segonds N, Allemand D, Tambutté S
  PLoS ONE 11(8): e0160368
• Coral reefs and climate change / Les coraux et le changement climatique
  Allemand D
  Ocean and climate change, Scientific Notes Second Edition, Tome 2: 32-39
• Des coraux au Centre Scientifique de Monaco
  Allemand D
  Revue de l'AMOPA 212: 28-31
• General Ecological Aspects of Anthozoan-Symbiodinium Interactions in the Mediterranean Sea
  Casado-Amezua P, Terron-Sigler A, Pinzon J H, Furla P, Forcioli D, Allemand D, Ribes M, Coma R
  Springer International Publishing: 375-386 Springer: 375-386
• Les actions de la Principauté de Monaco dans le domaine de l'acidification des océans : des recommandations pour qui ? Pour quoi ?
  Allemand D
  Entretien de Port-Cros L'océan et l'avenir de l'homme, les services écosystémiques_Fondation d'entreprise Total: 158-161
• Spirochaetes dominate the microbial community associated with the red coral Corallium rubrum on a broad geographic scale
  van de Water J A J M, Melkonian R, Junca H, Voolstra C R, Reynaud S, Allemand D, Ferrier-Pagès C
  Sci Rep 6: 27277
• Un exemple d'impact socioéconomique de l'acidification des océans et du changement climatique : les récifs coralliens
  Allemand D
  Entretien de Port-Cros L'océan et l'avenir de l'homme, les services écosystémiques_Fondation d'entreprise Total: 74-78

2015

• Bicarbonate transporters in corals point towards a key step in the evolution of cnidarian calcification
  Zoccola D, Ganot P, Bertucci A, Caminiti Segonds N, Técher N, Voolstra C R, Aranda M, Tambutté E, Allemand D, Casey J R, Tambutté S
  Sci Rep 5: 9983
• Bridging the gap between ocean acidification impacts and economic valuation: Regional impacts of ocean acidification on fisheries and aquaculture
  Hilmi N, Allemand D, Kavanagh C, Laffoley D, Metian M, Osborn D, Reynaud S
  IUCN Gland, 136pp.
• Contrasting futures for ocean and society from different anthropogenic CO₂ emissions scenarios
  Gattuso J-P, Magnan A, Billé R, Cheung W W L, Howes E L, Joos F, Allemand D, Bopp L, Cooley S R, Eakin C M, Hoegh-Guldberg O, Kelly R P, Pörtner H O, Rogers A D, Baxter J M, Laffoley D, Osborn D, Rankovic A, Rochette J, Sumalia U R, Treyer S, Turley C
  Science 349(6243): aac4722
• Coral reefs and climate change / Les coraux et le changement climatique
  Allemand D
  Ocean and climate change, Scientific Notes 64-70
• Institute Profile: The Centre Scientifique de Monaco—A Reference in the Study of Coral and Polar Biology
  Allemand D
  ASLO 22-23
• Les coraux : quelques gagnants et beaucoup de perdants
  Allemand D
  Les écosystèmes marins dans la régulation du climat Fonds Français pour l’Environnement Mondial (FFEM), Chap 3. Changements globaux et déséquilibres induits: 62-63
• Morphological plasticity of the coral skeleton under CO₂-driven seawater acidification
  Tambutté E, Venn A A, Holcomb M, Caminiti Segonds N, Técher N, Zoccola D, Allemand D, Tambutté S
  Nat Commun 6: 7368
• Récifs coralliens, remparts nourriciers
  Planes S, Allemand D
  Les écosystèmes marins dans la régulation du climat Fonds Français pour l’Environnement Mondial (FFEM), Chap. 2 Biodiversité, résilience et atténuation des impacts: 40-41
• Structural molecular components of Septate Junctions in cnidarians point to the origin of epithelial junctions in Eukaryotes
  Ganot P, Zoccola D, Tambutté E, Voolstra C R, Aranda M, Allemand D, Tambutté S
  Mol Biol Evol 32(1): 44-62

2014

• Centre Scientifique de Monaco moves to the Harbour - 20 tonnes of seawater on a roof !
  Allemand D
  Reef Encounter 29(2): 12-13
• Coral calcifying fluid pH dictates response to ocean acidification
  Holcomb M, Venn A A, Tambutté E, Tambutté S, Allemand D, Trotter J, McCulloch M
  Sci Rep 4: 5207
• Exposure of Mediterranean Countries to Ocean Acidification
  Hilmi N, Allemand D, Cinar M, Cooley S, Hall-Spencer J M, Haraldsson G, Hattam C, Jeffree R, Orr J C, Rehdanz K, Reynaud S, Safa A, Dupont S
  Water 6(6): 1719-1744
• Identification of MicroRNAs in the Coral Stylophora pistillata
  Liew Y J, Aranda M, Carr A, Baumgarten S, Zoccola D, Tambutté S, Allemand D, Micklem G, Voolstra C R
  PLoS ONE 9(3): e91101
• Light enhanced calcification in Stylophora pistillata: effects of glucose, glycerol and oxygen
  Holcomb M, Tambutté E, Allemand D, Tambutté S
  PeerJ 2: e375
• Transcriptome Analysis of the Scleractinian Coral Stylophora pistillata
  Zoccola D, Karako-Lampert S, Salmon-Divon M, Katzenellenbogen M, Tambutté S, Bertucci A, Hoegh-Guldberg O, Deleury E, Allemand D, Levy O
  PLoS ONE 9(2): e88615

2013

• Carbonic anhydrases in anthozoan corals-A review
  Bertucci A, Moya A, Tambutté S, Allemand D, Supuran C T, Zoccola D
  Bioorg Med Chem 21(6): 1437-1450
• Genes related to ion-transport and energy production are upregulated in response to CO₂-driven pH decrease in corals: new insights from transcriptome analysis
  Vidal-Dupiol J, Zoccola D, Tambutté E, Grunau C, Cosseau C, Smith K M, Freitag M, Dheilly N M, Allemand D, Tambutté S
  PLoS ONE 8(3): e58652
• Impact of seawater acidification on pH at the tissue-skeleton interface and calcification in reef corals
  Venn A A, Tambutté E, Holcomb M, Laurent J, Allemand D, Tambutté S
  Proc Natl Acad Sci USA 110(5): 1634-1639
• Regulation of intracellular pH in cnidarians: response to acidosis in Anemonia viridis
  Laurent J, Venn A A, Tambutté E, Ganot P, Allemand D, Tambutté S
  FEBS J 281(3): 683-695
• The influence of photosynthesis on host intracellular pH in scleractinian corals
  Laurent J, Tambutté S, Tambutté E, Allemand D, Venn A A
  J Exp Biol 216(8): 1398-1404
• Towards improved socio-economic assessments of ocean acidification's impacts
  Hilmi N, Allemand D, Dupont S, Safa A, Haraldsson G, Nunes P D, Moore C, Hattam C, Reynaud S, Hall-Spencer J M, Fine M, Turley C, Jeffree R, Orr J, Munday P L, Cooley S
  Mar Biol 160: 1773-1787

2012

• Calcein labelling and electrophysiology: Insights on coral tissue permeability and calcification
  Tambutté E, Tambutté S, Caminiti Segonds N, Zoccola D, Venn A A, Erez J, Allemand D
  Proc Biol Sci 279(1726): 19-27
• Cell biology of cnidarian-dinoflagellate symbiosis
  Davy S K, Allemand D, Weis V M
  Microbiol Mol Biol Rev 76(2): 229-261
• Molecular cloning and characterization of first organic matrix protein from Sclerites of Red Coral, Corallium rubrum
  Debreuil J, Tambutté E, Zoccola D, Deleury E, Guigonis J M, Samson M, Allemand D, Tambutté S
  J Biol Chem 287(23): 19367-19376

2011

• A new coral carbonic anhydrase in Stylophora pistillata
  Bertucci A, Tambutté S, Supuran C T, Allemand D, Zoccola D
  Mar Biotechnol 13(5): 992-1002
• Adaptations to endosymbiosis in a cnidarian-dinoflagellate association: Differential gene expression and specific gene duplications
  Ganot P, Moya A, Magnone V, Allemand D, Furla P, Sabourault C
  PLoS Genet 7(7): e1002187
• Comparative analysis of the soluble organic matrix of axial skeleton and sclerites of Corallium rubrum: Insights for biomineralization
  Debreuil J, Tambutté S, Zoccola D, Caminiti Segonds N, Técher N, Allemand D, Tambutté E
  Comp Biochem Physiol B, Biochem Mol Biol. 159(1): 40-48
• Coral biomineralization: From the gene to the environment
  Tambutté S, Holcomb M, Ferrier-Pagès C, Reynaud S, Tambutté E, Zoccola D, Allemand D
  J Exp Mar Biol Ecol 408(1-2): 58-78
• Coral calcification under ocean acidification and global change
  Erez J, Reynaud S, Silverman J, Schneider K, Allemand D
  Coral reefs: An ecosystem in transition Eds Dubinsky, Z. Stambler, N., Springer Netherlands vol. 3: 151-176
• Coral calcification, cells to reefs
  Allemand D, Tambutté E, Zoccola D, Tambutté S
  Coral reefs: An ecosystem in transition Eds Dubinsky, Z. Stambler, N., Springer Netherlands vol. 3: 119-150
• Depth-dependant thermotolerance of the symbiotic Mediterranean gorgonian Eunicella singularis: Evidence from cellular stress markers
  Pey A, Zamoum T, Allemand D, Furla P, Merle P L
  J Exp Mar Biol Ecol 404(1-2): 73-78
• Et si Lamarck avait raison ? La Symbiose comme mécanisme de transmission de caractères acquis
  Allemand D
  Bull Mus Anthropol Prehist 51: 173-178
• Experimental comparison of skeletal growth rates in the cold-water coral Madrepora oculata Linnaeus, 1758 and three tropical scleractinian corals
  Orejas C, Ferrier-Pagès C, Reynaud S, Tsounis G, Allemand D, Gili J M
  J Exp Mar Biol Ecol 405(1-2): 1-5
• High phosphate uptake requirements of the scleractinian coral Stylophora pistillata
  Godinot C, Grover R, Allemand D, Ferrier-Pagès C
  J Exp Biol 214(Pt 16): 2749-2754
• Live tissue imaging shows reef corals elevate pH under their calcifying tissue relative to seawater
  Venn A A, Tambutté E, Holcomb M, Allemand D, Tambutté S
  PLoS ONE 6(5): e20013
• Long-term growth rates of four Mediterranean cold-water coral species maintained in aquaria
  Orejas C, Ferrier-Pagès C, Reynaud S, Gori A, Béraud E, Tsounis G, Allemand D, Gili J M
  Mar Ecol Prog Ser 429: 57-65
• Physiological adaptation to symbiosis in cnidarians
  Furla P, Richier S, Allemand D
  Coral reefs: An ecosystem in transition Eds Dubinsky, Z. Stambler, N., Springer Netherlands vol. 3: 187-195
• Shallow water scleractinian corals of the Mediterranean Sea
  Ferrier-Pagès C, Reynaud S, Allemand D
  Life in the Mediterranean Sea : A look at habitat changes Eds Dubinsky, Z. Stambler, N., Nova Science Publisher Chap. 13
• Specific organic matrix characteristics in skeletons of Corallium species
  Debreuil J, Tambutté S, Zoccola D, Caminiti Segonds N, Técher N, Marschal C, Allemand D, Kosuge S, Tambutté E
  Mar Biol 158(12): 2765-2774
• Symbiont diversity is not involved in depth acclimation in the Mediterranean sea whip Eunicella singularis
  Forcioli D, Merle P L, Caligara C, Ciosi M, Muti C, Francour P, Cerrano C, Allemand D
  Mar Ecol Prog Ser 439: 57-71

2010

• Cnidarian / Dinoflagellate symbiosis-mediated adaptation to environmental perturbations
  Richier S, Sabourault C, Ferrier-Pagès C, Merle P L, Furla P, Allemand D
  Symbioses and Stress 17: 149-175
• Prey-capture rates in four Mediterranean cold water corals
  Tsounis G, Orejas C, Reynaud S, Gili J M, Allemand D, Ferrier-Pagès C
  Mar Ecol Prog Ser 398: 149-155
• Symbiosis-dependent gene expression in coral-dinoflagellate association: cloning and characterization of a P-type H⁺-ATPase gene
  Bertucci A, Tambutté E, Tambutté S, Allemand D, Zoccola D
  Proc R Soc Lond, B, Biol Sci 277(1678): 87-95
• Un monde trop acide pour les récifs coralliens
  Allemand D, Reynaud S, Salvat B
  Recherche 444: 56-58

2009

• Acidification and Coral reefs
  Salvat B, Allemand D
  Adaptation and Evolution in Marine Environments 31 pp.
• Carbonic anhydrase inhibitors: Inhibition studies of a coral secretory isoform with inorganic anions
  Bertucci A, Innocenti A, Zoccola D, Scozzafava A, Allemand D, Tambutté S, Supuran C T
  Bioorg Med Chem Lett 19(3): 650-653
• Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis
  Sabourault C, Ganot P, Deleury E, Allemand D, Furla P
  BMC Genomics 10: 333
• Coral bleaching under thermal stress: Putative involvement of host/symbiont recognition mechanisms
  Vidal-Dupiol J, Adjeroud M, Roger E, Foure L, Duval D, Mone Y, Ferrier-Pagès C, Tambutté E, Tambutté S, Zoccola D, Allemand D, Mitta G
  BMC Physiol 9: 14
• Effect of light and feeding on the nitrogen isotopic composition of a zooxanthellate coral: Role of nitrogen recycling
  Reynaud S, Martinez P, Billy I, Allemand D, Ferrier-Pagès C
  Mar Ecol Prog Ser 392: 103-110
• Future economic impacts of ocean acidification on mediterranean seafood: First assessment summary
  Hilmi N, Allemand D, Jeffree R A, Orr J C
  MEDCOAST09 597-608
• Imaging intracellular pH in a reef coral and symbiotic anemone
  Venn A A, Tambutté E, Lotto S, Zoccola D, Allemand D, Tambutté S
  Proc Natl Acad Sci USA 106(39): 16574-16579
• Oxygen isotopic signature of the skeletal microstructures in cultured corals: Identification of vital effects
  Juillet-Leclerc A, Reynaud S, Rollion-Bard C, Cuif J P, Dauphin Y, Blamart D, Ferrier-Pagès C, Allemand D
  Geochim Cosmochim Acta 73(18): 5320-5332
• Physiological response of the symbiotic gorgonian Eunicella singularis to a long-term temperature increase
  Ferrier-Pagès C, Tambutté E, Zamoum T, Caminiti Segonds N, Merle P L, Bensoussan N, Allemand D, Garrabou J, Tambutté S
  J Exp Biol 212(18): 3007-3015
• Relation de couple au soleil : l'endosymbiose Cnidaires-Dinoflagellés
  Furla P, Allemand D
  Biofutur 299: 40-43
• Specific expression of BMP2/4 ortholog in biomineralizing tissues of corals and action on mouse BMP receptor
  Zoccola D, Moya A, Beranger G E, Tambutté E, Allemand D, Carle G F, Tambutté S
  Mar Biotechnol 11(2): 260-269
• What Determines Coral Health?
  Weis V M, Allemand D
  Science 324(5931): 1153-1155

2008

• Calcification and associated physiological parameters during a stress event in the scleractinian coral Stylophora pistillata
  Moya A, Ferrier-Pagès C, Furla P, Richier S, Tambutté E, Allemand D, Tambutté S
  Comp Biochem Physiol A, Mol Integr Physiol. 151(1): 29-36
• Carbonic anhydrase in the scleractinian coral Stylophora pistillata - Characterization, localization, and role in biomineralization
  Moya A, Tambutté S, Bertucci A, Tambutté E, Lotto S, Vullo D, Supuran C T, Allemand D, Zoccola D
  J Biol Chem 283(37): 25475-25484
• Cloning and use of a coral 36B4 gene to study the differential expression of coral genes between light and dark conditions
  Moya A, Tambutté S, Beranger G, Gaume B, Scimeca J C, Allemand D, Zoccola D
  Mar Biotechnol 10(6): 653-663
• Coral calcification responds to seawater acidification: A working hypothesis towards a physiological mechanism
  Marubini F, Ferrier-Pagès C, Furla P, Allemand D
  Coral Reefs 27(3): 491-499
• Depth-dependant response to light of the reef building coral, Pocillopora verrucosa: Implication of oxidative stress
  Richier S, Cottalorda J-M, Guillaume M M M, Fernandez C, Allemand D, Furla P
  J Exp Mar Biol Ecol 357: 48-56
• Fish otolith calcification in relation to endolymph chemistry
  Allemand D, Mayer-Gostan N, De Pontual H, Boeuf G, Payan P
  Handbook of Biomineralization Wiley-VCH Verlag GmbH, vol. 1, Chap. 17: 291-308
• Organic matrix and biomineralization of scleractinian corals
  Tambutté S, Tambutté E, Zoccola D, Allemand D
  Handbook of Biomineralization Wiley-VCH Verlag GmbH, vol. 1, Chap. 14: 243-259
• Reply to the comment of Fritsch and Karampelas on "Determination of canthaxanthin in the red coral (Corallium rubrum) from Marseille by HPLC combined with UV and MS detection" by Cvejic et al. (2007) Mar Biol 152 : 855-862
  Cvejic J, Tambutté S, Lotto S, Mikov M, Slacanin I, Allemand D
  Mar Biol 154(5): 931-932
• Temporal and depth responses of two temperate corals, Cladocora caespitosa and Oculina patagonica, from the North Mediterranean Sea
  Rodolfo-Metalpa R, Reynaud S, Allemand D, Ferrier-Pagès C
  Mar Ecol Prog Ser 369: 103-114
• Uptake of dissolved free amino acids by the scleractinian coral Stylophora pistillata
  Grover R, Maguer J-F, Allemand D, Ferrier-Pagès C
  J Exp Biol 211(Pt 6): 860-865

2007

• Catalase characterization and implication in bleaching of a symbiotic sea anemone
  Merle P L, Sabourault C, Richier S, Allemand D, Furla P
  Free Radic Biol Med. 42(2): 236-246
• Characterization and role of carbonic anhydrase in the calcification process of the azooxanthellate coral Tubastrea aurea
  Tambutté S, Tambutté E, Zoccola D, Caminiti Segonds N, Lotto S, Moya A, Allemand D, Adkins J
  Mar Biol 151(1): 71-83
• Dark calcification and the daily rhythm of calcification in the scleractinian coral, Galaxea fascicularis
  Al-Horani F, Tambutté E, Allemand D
  Coral Reefs 26(3): 531-538
• Determination of canthaxanthin in the red coral (Corallium rubrum) from Marseille by HPLC combined with UV and MS detection
  Cvejic J, Tambutté S, Lotto S, Mikov M, Slacanin I, Allemand D
  Mar Biol 152(4): 855-862
• Effect of Tris-Hydroxymethyl Aminomethane on intracellular pH depends on the extracellular non-bicarbonate buffering capacity
  Giunti C, Priouzeau F, Allemand D, Levraut J
  Transl Res 150(6): 350-356
• Effects of temperature and UV radiation increases on the photosynthetic efficiency in four scleractinian coral species
  Ferrier-Pagès C, Richard C, Forcioli D, Allemand D, Pichon M, Shick J M
  Biol Bull 213(1): 76-87
• Evidence of low molecular weight components in the organic matrix of the reef building coral, Stylophora pistillata
  Puverel S, Houlbrèque F, Tambutté E, Zoccola D, Payan P, Caminiti Segonds N, Tambutté S, Allemand D
  Comp Biochem Physiol A, Mol Integr Physiol. 147(4): 850-856
• Light and temperature effects on Sr/Ca and Mg/Ca ratios in the scleractinian coral Acropora sp
  Reynaud S, Ferrier-Pagès C, Meibom A, Mostefaoui S, Mortlock R, Fairbanks R, Allemand D
  Geochim Cosmochim Acta 71(2): 354-362
• Observations of the tissue-skeleton interface in the scleractinian coral Stylophora pistillata
  Tambutté E, Allemand D, Zoccola D, Meibom A, Lotto S, Caminiti Segonds N, Tambutté S
  Coral Reefs 26(3): 517-529

2006

• Characterization and variations of organic parameters in teleost fish endolymph during day-night cycle, starvation and stress conditions
  Guibbolini M, Borelli G, Mayer-Gostan N, Priouzeau F, De Pontual H, Allemand D, Payan P
  Comp Biochem Physiol A, Mol Integr Physiol. 145(1): 99-107
• Growth and photosynthesis of two Mediterranean corals, Cladocora caespitosa and Oculina patagonica, under normal and elevated temperatures
  Rodolfo-Metalpa R, Richard C, Allemand D, Ferrier-Pagès C
  J Exp Biol 209: 4546-4556
• Light-Enhanced Calcification and dark decalcification in isolates of the Soft Coral Cladiella sp. during tissue recovery
  Tentori E, Allemand D
  Biol Bull 211(2): 193-202
• Oxidative stress and apoptotic events during thermal stress in the symbiotic sea anemone, Anemonia viridis
  Richier S, Sabourault C, Courtiade J, Zucchini N, Allemand D, Furla P
  FEBS J 273: 4186-4198
• Response of zooxanthellae in symbiosis with the Mediterranean corals Cladocora caespitosa and Oculina patagonica to elevated temperatures
  Rodolfo-Metalpa R, Richard C, Allemand D, Bianchi C N, Morri C, Ferrier-Pagès C
  Mar Biol 150: 45-55
• Study of calcification during a daily cycle of the coral Stylophora pistillata: implications for 'light-enhanced calcification'
  Moya A, Tambutté S, Tambutté E, Zoccola D, Caminiti Segonds N, Allemand D
  J Exp Biol 209(Pt 17): 3413-3419
• Urea uptake by the scleractinian coral Stylophora pistillata
  Grover R, Maguer J-F, Allemand D, Ferrier-Pagès C
  J Exp Mar Biol Ecol 332: 216-226
• Vital effects in coral skeletal composition display strict three-dimensional control
  Meibom A, Yurimoto H, Cuif J-P, Domart-Coulon I, Houlbrèque F, Constantz B, Dauphin Y, Tambutté E, Tambutté S, Allemand D, Wooden J, Dunbar R B
  Geophys Res Lett 33(11): L11608

2005

• Antibodies against the organic matrix in scleractinians: A new tool to study coral biomineralization
  Puverel S, Tambutté E, Zoccola D, Domart-Coulon I, Bouchot A, Lotto S, Allemand D, Tambutté S
  Adaptation and Evolution in Marine Environments 24(1): 149-156
• Bioaccumulation of zinc in the scleractinian coral Stylophora pistillata
  Ferrier-Pagès C, Houlbrèque F, Wyse E, Richard C, Allemand D, Boisson F
  Coral Reefs 24(4): 636-645
• Effects of starvation, ammonium concentration, and photosynthesis on the UV-dependent accumulation of mycosporine-like amino acids (MMAs) in the coral Stylophora pistillata
  Shick M, Ferrier-Pagès C, Grover R, Allemand D
  Mar Ecol Prog Ser 295: 135-156
• Soluble organic matrix of two Scleractinian corals: Partial and comparative analysis
  Puverel S, Tambutté E, Pereira-Mouries L, Zoccola D, Allemand D, Tambutté S
  Comp Biochem Physiol B, Biochem Mol Biol. 141(4): 480-487
• Stable isotopes (δ¹³C and δ¹⁵N) of organic matrix from coral skeleton
  Muscatine L, Goiran C, Land L, Jaubert J, Cuif J-P, Allemand D
  Proc Natl Acad Sci USA 102(5): 1525-1530
• Symbiosis-induced adaptation to oxidative stress
  Richier S, Furla P, Plantivaux A, Merle P L, Allemand D
  J Exp Biol 208(Pt 2): 277-285
• The Symbiotic Anthozoan: A Physiological chimera between Alga and Animal
  Furla P, Allemand D, Schick M, Ferrier-Pagès C, Richier S, Plantivaux A, Merle P L, Tambutté S
  Integr Comp Biol 45: 595-604

2004

• Biological control of skeleton formation in scleractinian corals
  Allemand D
  Geochim Cosmochim Acta 68(11): A204
• Biomineralisation in reef-building corals: from molecular mechanisms to environmental control
  Allemand D, Ferrier-Pagès C, Furla P, Houlbrèque F, Puverel S, Reynaud S, Tambutté E, Tambutté S, Zoccola D
  C R Palevol 3(6-7): 453-467
• Cell growth and calcification result from uncoupled physiological processes in the soft coral Litophyton arboreum
  Tentori E, Allemand D, Sheperd R
  Mar Ecol Prog Ser 276: 85-92
• Effect of light and temperature on calcification and strontium uptake in the scleractinian coral Acropora verweyi
  Reynaud S, Ferrier-Pagès C, Boisson F, Allemand D, Fairbanks R G
  Mar Ecol Prog Ser 279: 105-112
• Etude de la diversité génétique et phénotypique chez la gorgone symbiotique méditerranéenne Eunicella singularis (Esper, 1791)
  Caligara C, Forcioli D, Merle P L, Francour P, Allemand D
  Rapp Comm int Mer Médit 37: 499
• Interactions between zooplankton feeding, photosynthesis and skeletal growth in the scleractinian coral Stylophora pistillata
  Houlbrèque F, Tambutté E, Allemand D, Ferrier-Pagès C
  J Exp Biol 207(Pt 9): 1461-1469
• Molecular characterization of two CuZn-superoxide dismutases in a sea anemone
  Plantivaux A, Furla P, Zoccola D, Garello G, Forcioli D, Richier S, Merle P L, Tambutté E, Tambutté S, Allemand D
  Free Radic Biol Med. 37(8): 1170-1181
• Molecular cloning and localization of a PMCA P-type calcium ATPase from the coral Stylophora pistillata
  Zoccola D, Tambutté E, Kulhanek E, Puverel S, Scimeca J-C, Allemand D, Tambutté S
  Biochim Biophys Acta 1663: 117-126
• Short term viability of soft tissue detached from the skeleton of reef-building corals
  Domart-Coulon I, Tambutté S, Tambutté E, Allemand D
  J Exp Mar Biol Ecol 309(2): 199-217

2003

• Adaptation à la vie en symbiose des cnidaires à zooxanthelles
  Allemand D, Furla P, Merle P L, Plantivaux A, Richier S, Tambutté S
  Océanis Institut océanographique, vol.3-4: 30
• Characterization of superoxide dismutases in anoxia- and hyperoxia-tolerant symbiotic cnidarians
  Richier S, Merle P L, Furla P, Pigozzi D, Sola F, Allemand D
  Biochim Biophys Acta 1621(1): 84-91
• Daily variations of endolymph composition: Relationship with the otolith calcification process in trout
  Borelli G, Guibbolini M E, Mayer-Gostan N, Priouzeau F, De Pontual H, Allemand D, Puverel S, Tambutté E, Payan P
  J Exp Biol 206(Pt 15): 2685-2692
• Les coraux : Archives des océans tropicaux
  Juillet-Leclerc A, Allemand D, Blamart D, Dauphin Y, Ferrier-Pagès C, Reynaud S, Rollion-Bard C
  Océanis Institut océanographique, vol.3-4: 303-323
• Nitrate uptake in the scleractinian coral Stylophora pistillata
  Grover R, Maguer J-F, Allemand D, Ferrier-Pagès C
  Limnol Oceanogr 48(6): 9

2002

• Kinetics of strontium uptake in the scleractinian coral Stylophora pistillata
  Ferrier-Pagès C, Boisson F, Allemand D, Tambutté E
  Mar Ecol Prog Ser 245: 8

2000

• Artificial reefs in the Principality of Monaco: Protection and enhancement of coastal zones
  Allemand D, Debernardi E, Seaman W Jr
  Artificial Reefs in Europeans Seas Kluwer Academic Press, Eds Jensen, A. C. Collins, K. J. Lockwood, A. P. M., Chap. 8: 151-166
• Involvement of H⁺-ATPase and carbonic anhydrase in inorganic carbon uptake for endosymbiont photosynthesis
  Furla P, Allemand D, Orsenigo M N
  Am J Physiol Regul Integr Comp Physiol 278(4): R870-881
• Nos ancêtres les coraux
  Furla P, Allemand D
  Med Sci (Paris) 16(10): 1139-1140
• Physiological mechanisms underlying biomineralization process in the scleractinian coral Stylophora pistillata
  Allemand D, Zoccola D, Tambutté E
  Chemistry and Biology of Mineralized Tissues Proceedings of the Sixth International Conference, Vittel, France, 458 pp.
• Sources and mechanisms of inorganic carbon transport for coral calcification and photosynthesis
  Furla P, Galgani I, Durand I, Allemand D
  J Exp Biol 203(22): 3445-3457

1999

• Cloning of a calcium channel a1 subunit from the reef-building coral, Stylophora pistillata
  Zoccola D, Tambutté E, Senegas-Balas F, Michiels J F, Failla J P, Jaubert J M, Allemand D
  Gene 227(2): 157-167
• Photosynthesis and calcification at cellular, organismal and community levels in coral reefs : A review on interactions and control by carbonate chemistry
  Gattuso J-P, Allemand D, Frankignoulle M
  Am Zool 39(1): 160-183

1998

• Cell-specific density of symbiotic dinoflagellates in tropical anthozoans
  Muscatine L, Ferrier-Pagès C, Blackburn A, Gates R D, Baghdasarian G, Allemand D
  Coral Reefs 17(4): 329-337
• Diffusional permeability of dissolved inorganic carbon through the isolated oral epithelial layers of the sea anemone, Anemonia viridis
  Furla P, Tambutté S, Jaubert J M, Allemand D
  J Exp Mar Biol Ecol 221(1): 71-88
• Functional polarity of the tentacle of the sea anemone Anemonia viridis: role in inorganic carbon acquisition
  Furla P, Tambutté S, Jaubert J M, Allemand D
  Am Physiol Soc 274(2 Pt 2): R303-310
• Mechanisms of carbon acquisition for endosymbiont photosynthesis in Anthozoa
  Allemand D, Furla P, Tambutté S
  Can J Bot 76(6): 925-941
• Microheterotrophy in the zooxanthellate coral Stylophora pistillata: effects of light and ciliate density
  Ferrier-Pagès C, Allemand D, Gattuso J-P, Jaubert J M, Rassoulzadegan F
  Limnol Oceanogr 43(7): 1639-1648
• Organic matrix synthesis in the scleractinian coral Stylophora pistillata: role in biomineralization and potential target of the organotin tributyltin
  Allemand D, Tambutté E, Girard J P, Jaubert J M
  J Exp Biol 201(Pt 13): 2001-2009
• Release of dissolved organic carbon and nitrogen by the zooxanthellate coral Galaxea fascicularis
  Ferrier-Pagès C, Gattuso J-P, Cauwet G, Jaubert J M, Allemand D
  Mar Ecol Prog Ser 172: 265-274

1997

• Morphology of coral desmocytes, cells that anchor the calicoblastic epithelium to the skeleton
  Muscatine L, Tambutté E, Allemand D
  Coral Reefs 16(4): 205-213
• Photosynthesis, respiration and calcification of a zooxanthellate scleractinian coral under submerged and exposed conditions
  Romaine S, Tambutté E, Allemand D, Gattuso J-P
  Mar Biol 129(1): 175-182
• Transient Na⁺ stress in symbiotic dinoflagellates after isolation from coral-host cells and subsequent immersion in seawater
  Goiran C, Allemand D, Galgani I
  Mar Biol 129(4): 581-589
• Water permeability of the oral epithelial layers of the sea anemone, Anemonia viridis
  Tambutté S, Allemand D
  J Exp Zool 279(1): 1-8

1996

• A compartmental approach to the mechanism of calcification in hermatypic corals
  Tambutté E, Allemand D, Mueller E, Jaubert J M
  J Exp Biol 199(5): 1029-1041
• Dynamics of calcification in the mediterranean red coral, Corallium rubrum (Linnaeus) (Cnidaria, Octocorallia)
  Allemand D, Tambutté S
  J Exp Zool 276(4): 270-278
• Inorganic carbon supply to symbiont photosynthesis of the sea anemone, Anemonia viridis: Role of the oral epithelial layers
  Tambutté S, Allemand D, Jaubert J M
  Symbiosis 20: 199-217
• Inorganic carbon uptake for photosynthesis by the symbiotic coral/ dinoflagellate association. II. Mechanisms for bicarbonate uptake
  Al-Moghrabi S, Goiran C, Allemand D, Speziale N, Jaubert J M
  J Exp Mar Biol Ecol 199: 227-248
• Inorganic carbon uptake for photosynthesis by the symbiotic coral/dinoflagellate association I. Photosynthetic performances of symbionts and dependence on sea water bicarbonate
  Goiran C, Al-Moghrabi S, Allemand D, Jaubert J M
  J Exp Mar Biol Ecol 199(2): 207-225
• Permeability of the oral epithelial layers in cnidarians
  Tambutté S, Allemand D, Jaubert J M
  Mar Biol 126(1): 43-53

1995

• 2- Physiological processes in biomineralization.
  Allemand D
  Bull Inst Oceanogr N° spécial 14(2): Introduction to the session
• An improved ⁴⁵Ca protocol for investigating physiological mechanisms in coral calcification
  Tambutté E, Allemand D, Bourge I, Gattuso J-P, Jaubert J M
  Mar Biol 122(3): 453-459
• Effect of arachidonic acid on Na⁺/H⁺ exchange and neutral amino acid transport in sea urchin eggs
  Ciapa B, Allemand D, de Renzis G
  Exp Cell Res 218(1): 248-254
• Fatty acids of the scleractinian coral Galaxea fascicularis: Effect of light and feeding
  Al-Moghrabi S, Allemand D, Couret J M, Jaubert J M
  J Comp Physiol B, Biochem Syst Environ Physiol 165(3): 183-192
• La réserve à corail rouge
  Allemand D, Debernardi E, Gilles P, Ounaïs N, Theron D, Thevenin T
  XXans au service de la Nature AMPN, Editions EGC Monaco: 121-130
• Les récifs artificiels
  Allemand D, Debernardi E
  XXans au service de la Nature AMPN, Editions EGC Monaco: 81-84
• Les réserves sous-marines : Pour quoi faire ?
  Allemand D
  XXans au service de la Nature AMPN, Editions EGC Monaco: 43-44
• The Stylophora pistillata microcolony: a model for studying calcium transport process during coral biomineralization
  Tambutté E, Allemand D, Jaubert J M
  Bull Inst Oceanogr N° spécial 14(2): 79-87

1994

• The organic matrix of skeletal structures of the mediterranean Red Coral, Corallium rubrum
  Allemand D, Cuif J-P, Watabe N, Oishi M, Kawaguchi T
  Bull Inst Oceanogr N° spécial 14: 129-139

1993

• Effects of HgCl₂ on intracellular pH in sea urchin eggs: activation of H⁺ excretion and Na⁺/H⁺ exchange activity
  Allemand D, de Renzis G, Payan P
  Aquat Toxicol 26(3-4): 171-184
• Skeleton and sclerite formation in the precious red coral Corallium rubrum
  Grillo M C, Goldberg W M, Allemand D
  Mar Biol 117(1): 119-128
• The biology and skeletogenesis of the mediterranean red coral. A review.
  Allemand D
  Precious Corals & Octocoral research 2: 19-39
• Valine uptake by the scleractinian coral Galaxea fascicularis: Characterization and effect of light and nutritional status
  Al-Moghrabi S, Allemand D, Jaubert J M
  J Comp Physiol B, Biochem Syst Environ Physiol 163(5): 355-362

1992

• Biocalcification mechanism in gorgonians: ⁴⁵Ca uptake and deposition by the mediterranean red coral Corallium rubrum
  Allemand D, Grillo M-C
  J Exp Zool 262(3): 237-246

1990

• A Study of Cadmium and Calcium Transport into a Marine Unicellular Alga
  Romeo M, Karez C S, Allemand D, de Renzis G, Gnassia-Barelli M, Puiseux-Dao S
  Water and Ions in Biomolecular Systems Part of the Advances in Life Sciences book series (ALS): 249-256
• Ca-Cd interaction in the prymnesiophyte Cricosphaera elongata
  Karez C S, Allemand D, de Renzis G, Gnassia-Barelli M, Romeo M, Puiseux-Dao S
  Plant Cell Environ 13(5): 483-487

1989

• Alteration of calcium transport as a mechanism of cell injury induced by HgCl2 in sea urchin eggs
  Allemand D, Walter P, Delmas P, de Renzis G
  Mar Environ Res 28(1-4): 227-230
• Effect of the phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TTPA) upon membrane ionic exchanges in sea urchin eggs
  Ciapa B, Allemand D, Payan P
  Exp Cell Res 185(2): 407-418
• Mediating effect of calcium in HgCl₂ cytotoxicity in sea urchin egg: role of mitochondria in Ca²⁺-mediated cell death
  Walter P, Allemand D, de Renzis G, Payan P
  Biochim Biophys Acta 1012(3): 219-226

1988

• HgCl2-induced cell injury. Differential effects on membrane-located transport systems in unfertilized and fertilized sea urchin eggs
  Allemand D, de Renzis G, Payan P, Girard J-P, Vaissiere R
  Toxicology 50(2): 217-230